QuickBooks Payroll setup is a process to activate the service, which requires company and employee details, connecting your bank account, and configuring payroll tax preferences. Once payroll is set up, you can process employee payments accurately, handle taxes, and ensure timely payroll submissions.
If you are also looking for the detailed steps for QuickBooks Online payroll setup, read this guide. We have also covered the steps for payroll setup with QuickBooks Desktop.

Need QuickBooks payroll setup help to handle the payroll tasks? Contact our QB professional, and they will provide you with the best assistance.
Follow the steps below for the QuickBooks Online Payroll Setup.
If you are a QuickBooks Payroll Elite user, you can get help from any one of the experts to set up payroll. You can visit the Expert Setup section for placing a call or for scheduling an appointment.
1. If you choose to pay the employees now, you will be liable for any payroll taxes due unless the payroll setup is done.
2. On the other hand, if you pay your employees in the current year, you need to perform more tasks before running the payroll.
For adding the employees, you must require the following information.
Within this task, you are required to include your federal, state, and local payroll tax details.
You need to connect your payroll bank account with QuickBooks to access the direct deposit feature. Thus, it will allow you to pay and file payroll taxes accurately. For instant connection, you can use the direct deposit feature. The following are the details that you may require:
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Herein, provide the year-to-date paycheck details for each employee you have paid this year. This information will be helpful for reporting wages and taxes on the W-2 form and other payroll tax forms.
You may require the following information:
In this task, you have to notify how you wish to manage your payroll tax payments and filings. Below are a few options you can use to handle it.
You have to perform the following steps.
The following is the information that you require:
Herein, you can find out workers’ comp policies, 401 (k) plans, or health plans. Intuit does the partnership with providers to provide you with excellent services so that they can integrate with payroll easily.
Before paying employees, it’s essential to setup QuickBooks Desktop Payroll Enhanced.

After buying the QuickBooks Desktop Payroll Enhanced subscription, you must activate it. However, the steps may vary according to your purchase, whether it’s done online, by phone, or through a retail store.
If you have bought the payroll online or by phone, you will get a 16-digit service key via email. All you need is to enter the key in QuickBooks to access the payroll features easily.
If you won’t get the service key, look into your junk or spam folder. Otherwise, you can also access the automated Service Key Retrieval tool. For that, you must log in to your Intuit Account.
In this step, add all your employees, set up federal and state payroll taxes, and then mention paychecks plus tax payments you already paid this year.
You have to wait, as it may take some time to get your payroll details into QuickBooks. Considering this, the setup is designed in such a manner that it lets you add details as per your preference and then save them.
Herein, you must include your payroll details and then invite your employees to add some of their own details via QuickBooks Workforce if you are using QuickBooks Desktop Payroll Enhanced.
The following is the information that you require for each employee.
Herein, select from the given list of pay items, insurance benefits, and retirement deductions, or set up customer items. In case you provide employees paid vacation or sick time off, include those details also.
After setting up payroll items and time off, access the Assign to employees button. With this, you can apply the items to multiple employees at the same time.
Herein, you must add your federal and state payroll tax details. The QuickBooks Desktop Payroll Enhanced users can set up their payroll taxes electronically.
The following is the information that you require:
When you have previously paid employees this year, you have to add those paychecks and any tax payments you have made. You will get all these details on your employees’ W-2s at the end of the year.
If you still haven’t paid your employees this year, you don’t need to complete the setup.
The following is the information you require:
Herein, if you have mentioned the pay history, you have to provide your federal and state filing details for the closed quarters. QuickBooks will check out all the pay history details and then identify the errors. As a result, it will ensure that tour employees’ W-2s are accurate at the end of the year.
The following are the details that you require:
So, here we conclude this post and hope that now you can easily perform the QuickBooks Payroll setup. Thus, it will help in managing your employees’ payroll easily to pay them accurately. If you need expert assistance with QuickBooks Payroll setup or troubleshooting, connect with Qbookassist payroll professionals today.
Question 1: How does payroll work with QuickBooks?
Ans. Once you run payroll with QuickBooks, you can give approval timesheets from hourly employees and generate payroll checks. Also, you can print paychecks with paystubs or pay employees via the direct deposit feature.
Question 2: What is the first step when setting up payroll in QuickBooks Desktop?
Ans. To set up payroll in QuickBooks Desktop, move to the Employees and then click the Payroll Setup option. After this, perform the on-screen instructions to add employees, set up payroll items, and then add pay history.
Question 3: How to set up QuickBooks for payroll?
Ans. To set up QuickBooks for payroll, go to the payroll option from the left menu. Choose your plan and pick the suitable plan for your business requirements. Provide the Business details and then your contact information.
Question 4: Does QuickBooks automatically do payroll?
Ans. QBO Payroll saves your precious time by automatically managing paychecks for salaried and hourly team members who work for a set number of hours.
Question 5: How to turn on payroll in QuickBooks?
Ans. To turn on payroll in QuickBooks, perform these steps:
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